I am reading this paper entitled "Quantum algorithm for linear systems of equations" and am trying to understand a portion of the algorithm described on page 2 and in more detail in the appendix starting at the bottom of page 10 (section 3. Phase Estimation calculations).
Suppose we have a hermitian matrix $A$ of dimension $n$ and a vector $b$ of size $n$ and denote by $|u_j \rangle$ the eigenvectors of $A$, which are also eigenvectors of $e^{iAt}$, and $\lambda_j$ the corresponding eigenvalues. Ultimately this algorithm aims to find $x$ such that $Ax = b$.
Assuming we have access to the state $\left|\Psi_{0} \right\rangle = \sqrt{\frac {2} {T} } \sum_{\tau = 0} ^{T - 1} \sin \left(\frac {\pi(\tau + 1/2)} {T}\right) |\tau \rangle$, the algorithm instructs to apply $\sum_{\tau = 0} ^{T - 1} |\tau \rangle \langle \tau |\otimes e^{iA \tau to/T}$ to $|\Psi_{0} \rangle |b \rangle$, the former being referred to as a conditional Hamiltonian evolution. The register $C$ initially contains $|\Psi_0 \rangle $, while the register $I$ contains $|b \rangle$.
The author/s then writes "assume the target state is $|u_j \rangle$, so this becomes simply the condition phase $|\Psi_{\lambda_j t_o} \rangle = \sqrt{\frac {2} {T} } \sum_{\tau = 0} ^{T - 1} e^{\frac {i \lambda_j \tau t_{0}} {T}} \sin \left(\frac {\pi(\tau + 1/2)} {T}\right) |\tau \rangle |u_j\rangle$", where now we have a superposition of $|\Psi_0 \rangle$ and the result of applying $e^{iA\tau t_{0}/T}$ to the eigenvector $|u_j \rangle$. My questions are:
Are we not applying the conditional Hamiltonian evolution to $|\Psi_0 \rangle |b \rangle$? I know that $b$ can be decomposed mathematically as $b= c_1u_1 + \cdots + c_nu_n$ since these eigenvectors form an orthonormal basis. Why only consider the effect on $|u_j \rangle$?
What is going on with the $\sum_{\tau = 0} ^{T - 1} |\tau \rangle \langle \tau|$ portion of the sum in the conditional Hamiltonian evolution? In this answer here, it is described "[...] a control part. It means that the operation will be controlled by the state of the first quantum register (the register C as the exponent tells us)". I understand the "gist" of this statement but any reference to understand it more fully would be much appreciated.
Edit: Is $\sum_{\tau = 0} ^{T - 1} |\tau \rangle \langle \tau|$, not simply the identity matrix of dimension $T$? In which case the result after tensoring is a block matrix with $e^{iA\tau t_{0}/T}$ on the main diagonal, and $0_n$ elsewhere. Do I have this right?
After this step, a Fourier transform is applied to the register $C$, but at this point what is contained in register $ C$? The state $|\Psi_{\lambda_j t_o} \rangle $ seems to describe the superposition of registers $C,I$.
I would be happy to edit/add any information that can help decipher this. Thanks