I'm following the course Mathematical Methods of Quantum Information Theory by Reinhard Werner. In lecture 6, he gave a derivation of Choi-Jamiolkowski isomorphism, and I'm struggling to understand some parts of it.
Here's the proof, in which I added more details for rigor.
Let $H_A,H_B$ be finite-dimensional Hilbert spaces, and add an ancillary Hilbert space $H_R$ such that $\dim(H_R)=\dim(H_A)=d$. Let $\sigma\in H_R\otimes H_A$ be a pure state, so that $\sigma=|\Omega\rangle\langle\Omega|$, where $|\Omega\rangle\in H_R\otimes H_A$ is given by: $$ |\Omega\rangle=\sum_{i=1}^{d}c_i|ii\rangle, \tag{1} $$ where $|ii\rangle=|i\rangle_R \otimes |i\rangle_A\in H_R\otimes H_A$, being $(|i\rangle)_{i=1}^d$ an orthonormal basis of $H_R$ and $H_A$, with $c_i\geq0$.
Now, we define the quantum channel $\epsilon:B(H_A)\to B(H_B)$ by $\sigma\mapsto\epsilon(\sigma):=|\alpha\rangle$. Here $B(H)$ denote the set of bounded operators acting on an underlying Hilbert space $H$. We define the Choi matrix $\rho_\epsilon\in B(H_A\otimes H_B)$, corresponding to the channel $\epsilon$, by $$ \rho_\epsilon:=(I_R\otimes\epsilon)(|\Omega\rangle\langle\Omega|). \tag{2} $$
By complete positivity of $\epsilon$, $\rho_\epsilon$ must be positive. Then, we can expand $\rho_\epsilon$ as follows: Choosing the basis $( |i \rangle )_{i=1}^d$ of $H_A$ and $(| \alpha \rangle )_{i=1}^d$ of $H_R$, we construct the bases $(| i \rangle \langle j|)_{i=1}^d$ of $B(H_A)$ and $(| \alpha \rangle \langle \beta |)_{i=1}^d$ of $B(H_B)$. Thus, we can express $\rho_\epsilon$ as $$ \rho_\epsilon:=\sum_{i,j}^d \sum_{\alpha,\beta}^d (I_R\otimes\epsilon)(\sigma) |i\rangle\langle j| \otimes |\alpha\rangle\langle\beta|. \tag{3} $$ By taking the trace of (3), we obtain \begin{align} \text{Tr}\left( \sum_{i,j,\alpha,\beta}^d (I_R\otimes\epsilon)(\sigma) |i\rangle\langle j| \otimes |\alpha\rangle\langle \beta| \right) &= \sum_{i,j,\alpha,\beta}^d \text{Tr}((I_R\otimes\epsilon)(|\Omega\rangle\langle\Omega|) |i\rangle\langle j| \otimes |\alpha\rangle\langle \beta|) \tag{4.1} \\ &= \sum_{i,j,\alpha,\beta}^d \text{Tr}(|\Omega\rangle\langle\Omega| |i\rangle\langle j| \otimes \epsilon(|\alpha\rangle\langle \beta|)) \tag{4.2} \\ &= \sum_{i,j,\alpha,\beta}^d \langle\Omega| |i\rangle\langle j| \otimes \epsilon(|\alpha\rangle\langle \beta|) |\Omega \rangle \tag{4.3} \\ &= \sum_{i,j,\alpha,\beta}^d \sum_{k,l}^d \overline{c_k}c_l \langle kk| |i\rangle\langle j| \otimes \epsilon(|\alpha\rangle\langle\beta|) |ll\rangle \tag{4.4} \\ &= \sum_{i,j,\alpha,\beta}^d \sum_{k,l}^d \overline{c_k}c_l \langle k|i \rangle \langle j|l \rangle \langle k| \epsilon(|\alpha\rangle\langle\beta|) |l\rangle \tag{4.5} \\ &= \sum_{i,j,\alpha,\beta}^d \sum_{k,l}^d \overline{c_k}c_l \delta_{ki} \delta_{jl} \langle k| \epsilon(|\alpha\rangle\langle\beta|) |l\rangle \tag{4.6} \\ &= \sum_{i,j,\alpha,\beta}^d \overline{c_i}c_j \langle i| \epsilon(|\alpha\rangle\langle\beta|) |j\rangle \tag{4.7} \end{align}
Since for each $i,j,\alpha,\beta\in\{1,\ldots,d\}$, we have $\text{Tr}(\rho_\epsilon |i\rangle\langle j| \otimes |\alpha\rangle\langle \beta|) = \langle j\beta|\rho_\epsilon|i\alpha\rangle$, the coefficients to describe $\rho_\epsilon$ are in one-to-one correspondence with those of $\epsilon$.
Now, my doubt arises because I expanded $\rho_\epsilon$ with sums as in $(3)$; in contrast, Prof. Werner omitted them. So, my question is if this derivation is correct. Any comment or suggestion is welcomed.