I see that Toffoli and Hadamard gates are "universal for quantum calculation". This paper by Aharonov says that this universality has a slightly wider meaning than usual. This is clear from the fact that Toffoli and Hadamard gates are represented by matrices composed by real numbers, so they do not know anything about phase rotations and other gates that have imaginary numbers in their matrix. This is explained e.g. in this previous answer.
The matrices representing Toffoli and Hadamard gates are not only represended by real numbers, but, if we neglect a global real normalization factor, they are only composed by 0, 1, and -1. So we could work with them using amplitudes represented by integer numbers (times a global real normalization factor).
However, I still do not understand the extended definition of universality.
i) In the paper of Aharonov, the "universality" is still defined as the ability of approximating any other gate (definition 3). This is puzzling for me.
ii) On the other hand, this post suggests that the "universality" of Toffoli and Hadamard gates means that such circuits are able to perform BQP calculations. It is a weaker but very interesting statement.
iii) There is yet another interpretation, i.e. that Toffoli and Hadamard gates can implement any gate, if provided with suitable ancillae.
Probably my interpretation of (i) is wrong. (ii) says that we can perform the decision in BQP using circuits involving only real and integer numbers. Fascinating, but is it true? Probably (iii) is true, but it does not tell us too much about the possibility of quantum calculations with integer numbers, because the ancillae contain complex numbers.